Phenotypic and Genotypic Variations of Enterococcus Spp
NCT ID: NCT05751317
Last Updated: 2023-04-19
Study Results
The study team has not published outcome measurements, participant flow, or safety data for this trial yet. Check back later for updates.
Basic Information
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UNKNOWN
100 participants
OBSERVATIONAL
2023-04-01
2024-03-30
Brief Summary
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Among many species identified, E. faecalis and E. faecium are the most common species capable of causing infection and posing a threat of antimicrobial resistance, with E. faecalis accounting for the majority of infections.
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Detailed Description
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Enterococci reside in the gastrointestinal tract and usually function commensally with humans. They can, however, cause several infections, such as urinary tract infections (UTIs), intra-abdominal infection, bacteremia, or endocarditis.
Among many species identified, E. faecalis and E. faecium are the most common species capable of causing infection and posing a threat of antimicrobial resistance, with E. faecalis accounting for the majority of infections.
Pathogenic species of enterococci express many virulence factors such as adhesins, gelatinase, Enterococcus surface protein, aggregation substances and cytolysins along with biofilm formation. These factors enhance the ability of the pathogen to invade, attach and survive through the acquisition of nutrients in the host tissue. Their presence in drug resistant strains increases the severity of the infection
Enterococci are intrinsically resistant to antibiotics such as aminoglycosides and β-lactam-based antibiotics. Moderate resistance to aminoglycosides is due to the intrinsic low permeability of the enterococcal cell wall to the large aminoglycoside molecules and is more prevalent in E. faecium than E. faecalis. Intrinsic β-lactam resistance is due to the overexpression of penicillin-binding proteins with low affinity for β-lactams, which makes E. faecalis more resistant to penicillin than E. faecium
Moreover, enterococci can readily acquire resistance to antimicrobials, and vancomycin-resistant enterococci (VRE) are among the priority pathogens for which new antibiotics are needed.
In addition, biofilm formation is one of the strategies for the enterococci to evade the host's immune response and the inhibitory or killing effects of antibiotics.
This self-produced extracellular matrix also provides a suitable microenvironment for enterococci to grow and facilitates the transmission of mobile genetic elements (MGEs) between bacteria. Enterococcal biofilms have been implicated in indwelling device-related infections such as prosthetic valve endocarditis, prosthetic joint infections and catheter-related infections.
Biofilm forming bacteria show resistance to many antibiotics and immune response which results in treatment failure. Given the difficulty of treating and eradicating biofilm associated infections, there is an unmet need for therapeutic options other than antibiotics to prevent biofilm formation.
Nanoparticles are attracting attention given their very small size and various antibacterial properties. Nanoparticles can interact with bacteria per unit area, which can make the antibacterial activity of nanoparticles more powerful. Nanoparticles can also initiate several bactericidal pathways, such as disrupting the bacterial membrane and release of intracellular components, making it difficult for bacteria to become resistant.
Conditions
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Study Design
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CASE_CONTROL
CROSS_SECTIONAL
Study Groups
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samples containing Enterococci
Isolates of Enterococci will be identified by Gram staining, colony morphology, catalase test, and growth on Bile Esculin agar. All isolates will be identified to species level using Vitek2 automated system Strains confirmed as Enterococci will be examined for their antibiotic susceptibility by modified Kirby Bauer's disc diffusion method on MuellerHinton Agar.
The biofilm formation activity of Enterococci isolates will be tested using the microtiter plate technique Detection of the effect of nanoparticles on the antibiotic susceptibility profile of Enterococci. Detection of the effect of nanoparticles on the biofilm producing Enterococci. Molecular identification of some virulence factors genes and antibiotic resistance genes of Enterococci using PCR
Culture
* Samples will be transported to Medical Microbiology and Immunology Laboratory and will be inoculated on MacConkey medium.
* Pink colonies will be inoculated on bile esculin agar medium.
* Enterococci produce blackening of the agar
Staining:
The growing colonies on bile esculin agar medium will be examined microscopically after staining by Gram stain.
Biochemical reactions:
* Catalase test.
* Salt tolerance test
VITEK
Automated identification of Enterococci will be done with VITEK2 system.
Antibiotic sensitivity test
Strains confirmed as Enterococci will be examined for their antibiotic susceptibility by modified Kirby Bauer's disc diffusion method on Mueller-Hinton Agar.
nanoparticles effect
The effect of nanoparticles on Enterococci antimicrobial resistance pattern
The biofilm formation activity
The biofilm formation activity of Enterococci isolates will be tested using the microtiter plate technique
molecular diagnosis
Molecular identification of some virulence factors genes and antibiotic resistance genes of Enterococci using PCR
samples with bacteria other than enterococci
Culture
* Samples will be transported to Medical Microbiology and Immunology Laboratory and will be inoculated on MacConkey medium.
* Pink colonies will be inoculated on bile esculin agar medium.
* Enterococci produce blackening of the agar
Staining:
The growing colonies on bile esculin agar medium will be examined microscopically after staining by Gram stain.
Biochemical reactions:
* Catalase test.
* Salt tolerance test
VITEK
Automated identification of Enterococci will be done with VITEK2 system.
Interventions
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Culture
* Samples will be transported to Medical Microbiology and Immunology Laboratory and will be inoculated on MacConkey medium.
* Pink colonies will be inoculated on bile esculin agar medium.
* Enterococci produce blackening of the agar
Staining:
The growing colonies on bile esculin agar medium will be examined microscopically after staining by Gram stain.
Biochemical reactions:
* Catalase test.
* Salt tolerance test
VITEK
Automated identification of Enterococci will be done with VITEK2 system.
Antibiotic sensitivity test
Strains confirmed as Enterococci will be examined for their antibiotic susceptibility by modified Kirby Bauer's disc diffusion method on Mueller-Hinton Agar.
nanoparticles effect
The effect of nanoparticles on Enterococci antimicrobial resistance pattern
The biofilm formation activity
The biofilm formation activity of Enterococci isolates will be tested using the microtiter plate technique
molecular diagnosis
Molecular identification of some virulence factors genes and antibiotic resistance genes of Enterococci using PCR
Eligibility Criteria
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Inclusion Criteria
Exclusion Criteria
1 Month
90 Years
ALL
No
Sponsors
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Sohag University
OTHER
Responsible Party
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Mai Gamal Abdel Naser Abbas Khalifa
principal investigator
Principal Investigators
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Mona F Mohamed, professor
Role: STUDY_CHAIR
Sohag University
Wesam A Abu El wafa
Role: STUDY_CHAIR
Sohag University
Locations
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Faculty Of Medicine
Sohag, , Egypt
Countries
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Central Contacts
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Facility Contacts
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References
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Ferguson DM, Talavera GN, Hernandez LA, Weisberg SB, Ambrose RF, Jay JA. Virulence Genes among Enterococcus faecalis and Enterococcus faecium Isolated from Coastal Beaches and Human and Nonhuman Sources in Southern California and Puerto Rico. J Pathog. 2016;2016:3437214. doi: 10.1155/2016/3437214. Epub 2016 Apr 10.
Other Identifiers
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Soh-Med-23-02-10
Identifier Type: -
Identifier Source: org_study_id
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