Artificial Intelligence for the Prioritization of Genetic Background in Brugada Syndrome
NCT ID: NCT06376552
Last Updated: 2024-04-19
Study Results
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Basic Information
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COMPLETED
200 participants
OBSERVATIONAL
2018-12-19
2022-06-06
Brief Summary
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Detailed Description
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BS is inherited as an autosomal dominant trait with incomplete penetrance. While 23 genes have been associated with BS susceptibility, 70% of patients remain genetically uncharacterized, suggesting a more complex inheritance pattern. Genetics have not been incorporated into risk stratification guidelines, despite evidence linking certain genetic variants to higher arrhythmic risk. This knowledge gap underscores the importance of expanding our understanding of BS genetics to enhance diagnostic sensitivity and patient management.
This protocol builds upon preliminary data from a study granted by the Italian Ministry of Health (GR-2016-02362316), in which next-generation sequencing (NGS) was used to investigate the entire coding regions (Whole Exome Sequencing\_WES) of 200 BS patients. The study aimed to identify new BS candidate genes and characterize the genetic basis of the condition.
The cohort was selected based on the presence of a type I ECG, confirmed either spontaneously or induced by flecainide or ajmaline. Patients underwent thorough cardiac evaluations to rule out other conditions. Follow-up included yearly assessments and more frequent evaluations for patients with a higher risk of ventricular tachycardia.
A large number of genetic variants were identified by exploiting WES, prompting the use of Artificial Intelligence (AI) to prioritize the sequencing data. AI techniques, including advanced algorithms and machine learning, can streamline the identification of potentially disease-causing genetic variations by filtering out common variants, predicting pathogenicity, and integrating clinical data.
Given that over 70% of BS patients remain genetically undiagnosed, high-throughput sequencing approaches are crucial for a comprehensive understanding of BS genetics. This study aims to contribute to the identification of new genetic factors and improve risk stratification for affected patients. All sequencing data for this project have been generated and will be analyzed using AI, with no further patients to be enrolled or sequenced.
Conditions
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Study Design
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COHORT
RETROSPECTIVE
Study Groups
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BrS Patients
The 200 BS patients have been selected and clinically evaluated by Department of Cardiac Electrophysiology and Arrhythmology, San Raffaele Hospital, for the presence of a type I electrocardiogram (ECG), either spontaneous or induced by flecainide or ajmaline. Morphologic and functional characteristics of the heart have been analysed in all patients by trans-thoracic echocardiography and stress test to rule out patients with Arrhythmogenic Right Ventricular Dysplasia and ischemic heart disease. Among clinical characteristics, 12-lead signal averaged ECG parameters and all possible risk factors have been evaluated. Electrophysiological study has been performed in spontaneous BS pattern 1 ECG patients or patients with induced BS pattern 1 ECG and at least one risk factor. In patients with higher susceptibility for the induced Ventricular Tachycardia, ICD has been implanted.
No interventions assigned to this group
Eligibility Criteria
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Inclusion Criteria
18 Years
ALL
No
Sponsors
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IRCCS San Raffaele
OTHER
Responsible Party
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Chiara Di Resta
PhD
Principal Investigators
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Chiara Di Resta, PhD
Role: PRINCIPAL_INVESTIGATOR
IRCCS San Raffaele Hospital
Locations
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IRCCS San Raffaele
Milan, , Italy
Milano-Bicocca University
Milan, , Italy
Countries
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References
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Di Resta C, Pietrelli A, Sala S, Della Bella P, De Bellis G, Ferrari M, Bordoni R, Benedetti S. High-throughput genetic characterization of a cohort of Brugada syndrome patients. Hum Mol Genet. 2015 Oct 15;24(20):5828-35. doi: 10.1093/hmg/ddv302. Epub 2015 Jul 28.
Sommariva E, Pappone C, Martinelli Boneschi F, Di Resta C, Rosaria Carbone M, Salvi E, Vergara P, Sala S, Cusi D, Ferrari M, Benedetti S. Genetics can contribute to the prognosis of Brugada syndrome: a pilot model for risk stratification. Eur J Hum Genet. 2013 Sep;21(9):911-7. doi: 10.1038/ejhg.2012.289. Epub 2013 Jan 16.
Di Resta C, Berg J, Villatore A, Maia M, Pili G, Fioravanti F, Tomaiuolo R, Sala S, Benedetti S, Peretto G. Concealed Substrates in Brugada Syndrome: Isolated Channelopathy or Associated Cardiomyopathy? Genes (Basel). 2022 Sep 28;13(10):1755. doi: 10.3390/genes13101755.
Other Identifiers
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AI4Cardio
Identifier Type: -
Identifier Source: org_study_id
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