Human Genomic Population Structure and Phenotype-genotype Variation in ADME Genes in Four Populations

NCT ID: NCT02789527

Last Updated: 2017-05-10

Study Results

Results pending

The study team has not published outcome measurements, participant flow, or safety data for this trial yet. Check back later for updates.

Basic Information

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Recruitment Status

COMPLETED

Clinical Phase

NA

Total Enrollment

367 participants

Study Classification

INTERVENTIONAL

Study Start Date

2015-11-30

Study Completion Date

2017-04-30

Brief Summary

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Physicians know that their patients can react differently to the same medical treatment: for some of them, the drug will prove inefficient, whereas for others it might provoke side-effects, sometimes rather serious. Such differences in response to drug intake are due to several factors, of which molecular variations in specific genes, named " ADME " (Absorption, Distribution, Metabolism, Excretion). This project aims at investigating the evolutionary mechanisms responsible for the diversity of ADME genes in human populations. Because of their role at the interface between the organism and its chemical environment, ADME genes are likely targets of recent selective pressures linked to changes in the environments in which humans evolved, such as changes in dietary habits for instance.

The aim of this project is to study the diversity of ADME genes and of their expression in five populations located along a latitudinal axis that extends from East Africa to Central Europe, passing through the Arabian Peninsula and the Mediterranean area, so as to take into account environmental factors that might have influenced the evolution of this diversity. This project is thus intended to evidence the evolutionary mechanisms that shaped genomic regions that are functionally important from the clinical and epidemiological point of view. Moreover, it will allow us to extend the knowledge of human molecular diversity and its evolution to a key-region of the peopling history of our species.

Detailed Description

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Conditions

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Healthy

Study Design

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Allocation Method

NON_RANDOMIZED

Intervention Model

PARALLEL

Primary Study Purpose

BASIC_SCIENCE

Blinding Strategy

NONE

Study Groups

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Healthy volunteers in Ethiopia

Phenotype and genotype of enzymes involved in drug metabolism in Ethiopia population

Group Type EXPERIMENTAL

Phenotyping

Intervention Type DRUG

finger-tip blood drop : enzymatic activities assessed by specific single point concentration ratios after oral intake of the Geneva micrococktail made of : CYP1A2: paraxanthine/caffeine CYP2B6: 4-hydroxybupropion/bupropion CYP2C9: 4-hydroxyflurbiprofen/flurbiprofen CYP2C19: 5-hydroxyomeprazole/omeprazole CYP2D6: dextrorphan/dextromethorphan CYP3A4: 1-hydroxymidazolam/midazolam

Genotyping

Intervention Type GENETIC

DNA sampling from a saliva sample

Healthy volunteers in Oman

Phenotype and genotype of enzymes involved in drug metabolism in Oman population

Group Type EXPERIMENTAL

Phenotyping

Intervention Type DRUG

finger-tip blood drop : enzymatic activities assessed by specific single point concentration ratios after oral intake of the Geneva micrococktail made of : CYP1A2: paraxanthine/caffeine CYP2B6: 4-hydroxybupropion/bupropion CYP2C9: 4-hydroxyflurbiprofen/flurbiprofen CYP2C19: 5-hydroxyomeprazole/omeprazole CYP2D6: dextrorphan/dextromethorphan CYP3A4: 1-hydroxymidazolam/midazolam

Genotyping

Intervention Type GENETIC

DNA sampling from a saliva sample

Healthy volunteers in the Czech Republic

Phenotype and genotype of enzymes involved in drug metabolism in Czech Republic population

Group Type EXPERIMENTAL

Phenotyping

Intervention Type DRUG

finger-tip blood drop : enzymatic activities assessed by specific single point concentration ratios after oral intake of the Geneva micrococktail made of : CYP1A2: paraxanthine/caffeine CYP2B6: 4-hydroxybupropion/bupropion CYP2C9: 4-hydroxyflurbiprofen/flurbiprofen CYP2C19: 5-hydroxyomeprazole/omeprazole CYP2D6: dextrorphan/dextromethorphan CYP3A4: 1-hydroxymidazolam/midazolam

Genotyping

Intervention Type GENETIC

DNA sampling from a saliva sample

Healthy volunteers in Greece

Phenotype and genotype of enzymes involved in drug metabolism in Greek population

Group Type EXPERIMENTAL

Phenotyping

Intervention Type DRUG

finger-tip blood drop : enzymatic activities assessed by specific single point concentration ratios after oral intake of the Geneva micrococktail made of : CYP1A2: paraxanthine/caffeine CYP2B6: 4-hydroxybupropion/bupropion CYP2C9: 4-hydroxyflurbiprofen/flurbiprofen CYP2C19: 5-hydroxyomeprazole/omeprazole CYP2D6: dextrorphan/dextromethorphan CYP3A4: 1-hydroxymidazolam/midazolam

Genotyping

Intervention Type GENETIC

DNA sampling from a saliva sample

Interventions

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Phenotyping

finger-tip blood drop : enzymatic activities assessed by specific single point concentration ratios after oral intake of the Geneva micrococktail made of : CYP1A2: paraxanthine/caffeine CYP2B6: 4-hydroxybupropion/bupropion CYP2C9: 4-hydroxyflurbiprofen/flurbiprofen CYP2C19: 5-hydroxyomeprazole/omeprazole CYP2D6: dextrorphan/dextromethorphan CYP3A4: 1-hydroxymidazolam/midazolam

Intervention Type DRUG

Genotyping

DNA sampling from a saliva sample

Intervention Type GENETIC

Eligibility Criteria

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Inclusion Criteria

* Women and men in good health
* Aged between 18 and 50 years
* Students or staff in the Academic Institutions where sampling will take place
* With the 2 parents and four grand-parents born to the population;
* Able to provide informed consent

Exclusion Criteria

* Pregnant or breastfeeding women; or women that consider that being pregnant is a possibility;
* Allergic to one of the compounds included in micrococktail (Caffeine, Bupropion, Flurbiprofen, Omeprazole, Dextromethorphan, Midazolam, and Fexofenadine);
* Pedigree related to another volunteer participant (siblings, cousins, uncles/aunts, nephews, etc.);
Minimum Eligible Age

18 Years

Maximum Eligible Age

50 Years

Eligible Sex

ALL

Accepts Healthy Volunteers

Yes

Sponsors

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Swiss National Science Foundation

OTHER

Sponsor Role collaborator

Estella S. Poloni

OTHER

Sponsor Role lead

Responsible Party

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Estella S. Poloni

Dr

Responsibility Role SPONSOR_INVESTIGATOR

Principal Investigators

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Estella S. Poloni, Dr

Role: STUDY_CHAIR

University of Geneva/Department of Genetics and Evolution

Locations

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Charles University in Prague/Faculty of Science/Department of Anthropology and Human Genetics

Prague, , Czechia

Site Status

Addis Ababa University/College of Health Sciences

Addis Ababa, , Ethiopia

Site Status

Democritus University of Thrace/School of Health Sciences/University Campus, Dragana

Alexandroupoli, , Greece

Site Status

Sultan Qaboos University/College of Medicine and Health Sciences/Department of Pharmacology

Muscat, , Oman

Site Status

Countries

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Czechia Ethiopia Greece Oman

References

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Rollason V, Mouterde M, Daali Y, Cizkova M, Priehodova E, Kulichova I, Posova H, Petanova J, Mulugeta A, Makonnen E, Al-Habsi A, Davidson R, Al-Balushi KK, Al-Thihli K, Cerna M, Al-Yahyaee S, Cerny V, Yimer G, Poloni ES, Desmeules J. Safety of the Geneva Cocktail, a Cytochrome P450 and P-Glycoprotein Phenotyping Cocktail, in Healthy Volunteers from Three Different Geographic Origins. Drug Saf. 2020 Nov;43(11):1181-1189. doi: 10.1007/s40264-020-00983-8.

Reference Type DERIVED
PMID: 32851583 (View on PubMed)

Other Identifiers

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15-169

Identifier Type: -

Identifier Source: org_study_id

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