Trial Outcomes & Findings for Clinical Evaluation of the APTIMA® HPV Assay Using the TIGRIS® System (NCT NCT00973362)

NCT ID: NCT00973362

Last Updated: 2017-01-06

Results Overview

Adjunct 30+ yrs. Population: Aptima HPV Assay Performance for Detecting CIN2+: Compare Clinical Performance of the Aptima HPV Assay to a FDA-Approved HPV Assay for Detecting CIN2+

Recruitment status

COMPLETED

Study phase

PHASE3

Target enrollment

12896 participants

Primary outcome timeframe

Baseline Evaluation

Results posted on

2017-01-06

Participant Flow

Participant milestones

Participant milestones
Measure
Adjunct (i.e. Normal Pap)
The Adjunct study will evaluate APTIMA HPV Assay performance for detecting high-risk HPV types in female subjects 30+ years of age with negative (NILM) cytology results from routine Pap testing. This will be accomplished by evaluating the assay performance compared to known cervical disease status at baseline and after a 3-year follow-up period. APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44).
ASC-US
The ASC-US study will determine the sensitivity and specificity of the APTIMA HPV Assay for detecting high-risk HPV types in subjects with ASC-US Pap test results from routine Pap testing and known cervical disease status (based on colposcopic biopsy results). APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44). There is no follow-up period for the ASC-US Arm of the study, only for the Adjunct ARM has a three (3) year follow-up period.
Baseline Evaluation
STARTED
11644
1252
Baseline Evaluation
Evaluable for Analysis
10871
958
Baseline Evaluation
Conclusive Disease Status
819
939
Baseline Evaluation
COMPLETED
10871
1029
Baseline Evaluation
NOT COMPLETED
773
223
3-Year Follow-up
STARTED
10871
0
3-Year Follow-up
COMPLETED
10854
0
3-Year Follow-up
NOT COMPLETED
17
0

Reasons for withdrawal

Reasons for withdrawal
Measure
Adjunct (i.e. Normal Pap)
The Adjunct study will evaluate APTIMA HPV Assay performance for detecting high-risk HPV types in female subjects 30+ years of age with negative (NILM) cytology results from routine Pap testing. This will be accomplished by evaluating the assay performance compared to known cervical disease status at baseline and after a 3-year follow-up period. APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44).
ASC-US
The ASC-US study will determine the sensitivity and specificity of the APTIMA HPV Assay for detecting high-risk HPV types in subjects with ASC-US Pap test results from routine Pap testing and known cervical disease status (based on colposcopic biopsy results). APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44). There is no follow-up period for the ASC-US Arm of the study, only for the Adjunct ARM has a three (3) year follow-up period.
Baseline Evaluation
W/D, later determined to be ineligible
25
0
Baseline Evaluation
No colposcopy visit
62
0
Baseline Evaluation
Inevaluable
686
223
3-Year Follow-up
Lost to Follow-up
17
0

Baseline Characteristics

Clinical Evaluation of the APTIMA® HPV Assay Using the TIGRIS® System

Baseline characteristics by cohort

Baseline characteristics by cohort
Measure
Adjunct (i.e. Normal Pap)
n=10871 Participants
The Adjunct study will evaluate APTIMA HPV Assay performance for detecting high-risk HPV types in female subjects 30+ years of age with negative (NILM) cytology results from routine Pap testing. This will be accomplished by evaluating the assay performance compared to known cervical disease status at baseline and after a 3-year follow-up period. APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44).
ASC-US
n=958 Participants
The ASC-US study will determine the sensitivity and specificity of the APTIMA HPV Assay for detecting high-risk HPV types in subjects with ASC-US Pap test results from routine Pap testing and known cervical disease status (based on colposcopic biopsy results). APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44).
Total
n=11829 Participants
Total of all reporting groups
Age, Continuous
44.1 Years
STANDARD_DEVIATION 10.1 • n=93 Participants
33.8 Years
STANDARD_DEVIATION 10.3 • n=4 Participants
43.3 Years
STANDARD_DEVIATION 10.5 • n=27 Participants
Age, Customized
21 - <30 years
0 participants
n=93 Participants
418 participants
n=4 Participants
418 participants
n=27 Participants
Age, Customized
30 - <40 years
4199 participants
n=93 Participants
266 participants
n=4 Participants
4465 participants
n=27 Participants
Age, Customized
40+ years
6672 participants
n=93 Participants
274 participants
n=4 Participants
6946 participants
n=27 Participants
Gender
Female
10871 Participants
n=93 Participants
958 Participants
n=4 Participants
11829 Participants
n=27 Participants
Gender
Male
0 Participants
n=93 Participants
0 Participants
n=4 Participants
0 Participants
n=27 Participants
Ethnicity (NIH/OMB)
Hispanic or Latino
3421 Participants
n=93 Participants
195 Participants
n=4 Participants
3616 Participants
n=27 Participants
Ethnicity (NIH/OMB)
Not Hispanic or Latino
6881 Participants
n=93 Participants
712 Participants
n=4 Participants
7593 Participants
n=27 Participants
Ethnicity (NIH/OMB)
Unknown or Not Reported
569 Participants
n=93 Participants
51 Participants
n=4 Participants
620 Participants
n=27 Participants
Race (NIH/OMB)
American Indian or Alaska Native
76 Participants
n=93 Participants
12 Participants
n=4 Participants
88 Participants
n=27 Participants
Race (NIH/OMB)
Asian
622 Participants
n=93 Participants
27 Participants
n=4 Participants
649 Participants
n=27 Participants
Race (NIH/OMB)
Native Hawaiian or Other Pacific Islander
48 Participants
n=93 Participants
1 Participants
n=4 Participants
49 Participants
n=27 Participants
Race (NIH/OMB)
Black or African American
1358 Participants
n=93 Participants
218 Participants
n=4 Participants
1576 Participants
n=27 Participants
Race (NIH/OMB)
White
6831 Participants
n=93 Participants
566 Participants
n=4 Participants
7397 Participants
n=27 Participants
Race (NIH/OMB)
More than one race
128 Participants
n=93 Participants
28 Participants
n=4 Participants
156 Participants
n=27 Participants
Race (NIH/OMB)
Unknown or Not Reported
1808 Participants
n=93 Participants
106 Participants
n=4 Participants
1914 Participants
n=27 Participants
Region of Enrollment
United States
10871 participants
n=93 Participants
958 participants
n=4 Participants
11829 participants
n=27 Participants

PRIMARY outcome

Timeframe: Baseline Evaluation

Adjunct 30+ yrs. Population: Aptima HPV Assay Performance for Detecting CIN2+: Compare Clinical Performance of the Aptima HPV Assay to a FDA-Approved HPV Assay for Detecting CIN2+

Outcome measures

Outcome measures
Measure
APTIMA HPV Assay
n=819 Participants
The Adjunct study will evaluate APTIMA HPV Assay clinical performance for detecting high-risk HPV types in female subjects 30+ years of age with negative (NILM) cytology results from routine Pap testing. This will be accomplished by evaluating the assay performance compared to known cervical disease status at baseline and after a 3-year follow-up period. APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44).
FDA-Approved HPV DNA Test
FDA-Approved HPV DNA Test as Comparator
Adjunct Study Arm: Compare Assay Performance for Aptima HPV Assay to a FDA-Approved HPV Assay for Detecting CIN2+
Assay Positive, CIN2+
15 participants
Adjunct Study Arm: Compare Assay Performance for Aptima HPV Assay to a FDA-Approved HPV Assay for Detecting CIN2+
Assay Negative, CIN2+
5 participants
Adjunct Study Arm: Compare Assay Performance for Aptima HPV Assay to a FDA-Approved HPV Assay for Detecting CIN2+
Assay Positive, No Disease
299 participants
Adjunct Study Arm: Compare Assay Performance for Aptima HPV Assay to a FDA-Approved HPV Assay for Detecting CIN2+
Assay Negative, No Disease
500 participants

PRIMARY outcome

Timeframe: Baseline Evaluation

Population: 18 women with Aptima HPV results did not have FDA-Approved DNA test results due to insufficient volume of the cytology specimen for a N of 801 compared to a N of 819 for the Aptima HPV assay results.

Adjunct Study Arm: 30+ yrs. Population: FDA-Approved HPV DNA Assay Performance for Detecting CIN2+: Compare Clinical Performance of the Aptima HPV Assay to a FDA-Approved HPV Assay for Detecting CIN2+

Outcome measures

Outcome measures
Measure
APTIMA HPV Assay
n=801 Participants
The Adjunct study will evaluate APTIMA HPV Assay clinical performance for detecting high-risk HPV types in female subjects 30+ years of age with negative (NILM) cytology results from routine Pap testing. This will be accomplished by evaluating the assay performance compared to known cervical disease status at baseline and after a 3-year follow-up period. APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44).
FDA-Approved HPV DNA Test
FDA-Approved HPV DNA Test as Comparator
Adjunct Study Arm: Compare Assay Performance for FDA-Approved HPV DNA Assay to a FDA-Approved HPV Assay for Detecting CIN2+
Assay Positive, CIN2+
16 participants
Adjunct Study Arm: Compare Assay Performance for FDA-Approved HPV DNA Assay to a FDA-Approved HPV Assay for Detecting CIN2+
Assay Negative, CIN2+
3 participants
Adjunct Study Arm: Compare Assay Performance for FDA-Approved HPV DNA Assay to a FDA-Approved HPV Assay for Detecting CIN2+
Assay Positive, No Disease
401 participants
Adjunct Study Arm: Compare Assay Performance for FDA-Approved HPV DNA Assay to a FDA-Approved HPV Assay for Detecting CIN2+
Assay Negative, No Disease
381 participants

SECONDARY outcome

Timeframe: Baseline Evaluation

ASC-US Study Arm: 21+ yrs. Population: Aptima HPV assay performance on Tigris System for detecting CIN2+ (All Biopsies)

Outcome measures

Outcome measures
Measure
APTIMA HPV Assay
n=939 Participants
The Adjunct study will evaluate APTIMA HPV Assay clinical performance for detecting high-risk HPV types in female subjects 30+ years of age with negative (NILM) cytology results from routine Pap testing. This will be accomplished by evaluating the assay performance compared to known cervical disease status at baseline and after a 3-year follow-up period. APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44).
FDA-Approved HPV DNA Test
n=865 Participants
FDA-Approved HPV DNA Test as Comparator
ASC-US Study Arm: Aptima HPV Assay Performance for Detecting CIN2+ (All Biopsies)
Assay Positive, CIN2+
79 participants
79 participants
ASC-US Study Arm: Aptima HPV Assay Performance for Detecting CIN2+ (All Biopsies)
Assay Negative, CIN2+
12 participants
10 participants
ASC-US Study Arm: Aptima HPV Assay Performance for Detecting CIN2+ (All Biopsies)
Assay Positive, No Disease
315 participants
343 participants
ASC-US Study Arm: Aptima HPV Assay Performance for Detecting CIN2+ (All Biopsies)
Assay Negative, No Disease
533 participants
433 participants

SECONDARY outcome

Timeframe: Baseline Evaluation

Population: 74 women with Aptima HPV assay results did not have FDA-Approved HPV DNA test results primarily due to insufficient volume of the cytology specimen for an N of 865 results for the FDA-Approved HPV DNA assay compared to 939 results for the Aptima HPV assay.

ASC\_US Study Arm: 21+ yrs. Population for Detecting CIN2+ (All Biopsies): FDA-Approved HPV DNA Assay

Outcome measures

Outcome measures
Measure
APTIMA HPV Assay
n=865 Participants
The Adjunct study will evaluate APTIMA HPV Assay clinical performance for detecting high-risk HPV types in female subjects 30+ years of age with negative (NILM) cytology results from routine Pap testing. This will be accomplished by evaluating the assay performance compared to known cervical disease status at baseline and after a 3-year follow-up period. APTIMA HPV Assay: The APTIMA HPV Assay is an in vitro nucleic acid amplification test (NAAT) that qualitatively detects human papillomavirus (HPV) E6/E7 messenger RNA (mRNA) from 14 HPV types (types 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, and 68) that are associated with cervical cancer ("high-risk types"). The assay cannot determine the specific high-risk HPV type(s) present and does not cross-react with 5 HPV types that are considered non-oncogenic (not associated with cervical cancer; types 6, 11, 42, 43, and 44).
FDA-Approved HPV DNA Test
FDA-Approved HPV DNA Test as Comparator
ASC-US Study Arm: FDA-Approved HPV DNA Assay Performance for Detecting CIN2+ (All Biopsies)
Assay Positive, CIN2+
79 participants
ASC-US Study Arm: FDA-Approved HPV DNA Assay Performance for Detecting CIN2+ (All Biopsies)
Assay Negative, CIN2+
10 participants
ASC-US Study Arm: FDA-Approved HPV DNA Assay Performance for Detecting CIN2+ (All Biopsies)
Assay Positive, No Disease
343 participants
ASC-US Study Arm: FDA-Approved HPV DNA Assay Performance for Detecting CIN2+ (All Biopsies)
Assay Negative, No Disease
433 participants

Adverse Events

Adjunct (i.e. Normal Pap)

Serious events: 0 serious events
Other events: 0 other events
Deaths: 0 deaths

ASC-US

Serious events: 0 serious events
Other events: 0 other events
Deaths: 0 deaths

Serious adverse events

Adverse event data not reported

Other adverse events

Adverse event data not reported

Additional Information

Vice President Clinical Affairs

Hologic, Inc.

Phone: 858-410-8000

Results disclosure agreements

  • Principal investigator is a sponsor employee
  • Publication restrictions are in place

Restriction type: LTE60